Description : conjugative coupling factor TraD, PFGI-1 class [Ensembl]. TraM recognition site of TraD and TraG [Interproscan].
Gene families : OG_02_0003005 (OrthoFinder) Phylogenetic Tree(s): OG0003005_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRN76448 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
CRN67074 | No alias | conjugative coupling factor TraD, PFGI-1 class... | 0.26 | OrthoFinder | |
EDJ90762 | CGSHi22421_00320 | hypothetical protein [Ensembl]. TraM recognition site of... | 0.14 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
MF | GO:0005507 | copper ion binding | IEP | Enrichment |
CC | GO:0005694 | chromosome | IEP | Enrichment |
BP | GO:0006878 | cellular copper ion homeostasis | IEP | Enrichment |
CC | GO:0009279 | cell outer membrane | IEP | Enrichment |
BP | GO:0010035 | response to inorganic substance | IEP | Enrichment |
BP | GO:0010038 | response to metal ion | IEP | Enrichment |
BP | GO:0042221 | response to chemical | IEP | Enrichment |
BP | GO:0046688 | response to copper ion | IEP | Enrichment |
MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
BP | GO:0055070 | copper ion homeostasis | IEP | Enrichment |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032689 | TraG-D_C | 509 | 636 |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_00494 |