CRN76448


Description : conjugative coupling factor TraD, PFGI-1 class [Ensembl]. TraM recognition site of TraD and TraG [Interproscan].


Gene families : OG_02_0003005 (OrthoFinder) Phylogenetic Tree(s): OG0003005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN76448
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
CRN67074 No alias conjugative coupling factor TraD, PFGI-1 class... 0.26 OrthoFinder
EDJ90762 CGSHi22421_00320 hypothetical protein [Ensembl]. TraM recognition site of... 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006878 cellular copper ion homeostasis IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR032689 TraG-D_C 509 636