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CRN76908


Description : type IV secretion system ATPase VirB4 [Ensembl]. F pilus assembly Type-IV secretion system for plasmid transfer [Interproscan].


Gene families : OG_02_0002475 (OrthoFinder) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN76908
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AGT22597 N559_0807 hypothetical protein [Ensembl]. F pilus assembly Type-IV... 0.13 OrthoFinder
CRN66794 No alias conjugal transfer protein TrbE [Ensembl]. F pilus... 0.26 OrthoFinder
EDJ90748 CGSHi22421_00250 hypothetical protein [Ensembl]. F pilus assembly Type-IV... 0.15 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006878 cellular copper ion homeostasis IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR025955 TraC/Conjuga_ATPase 65 343
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_00512