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CRN77147


Description : integrating conjugative element relaxase, PFGI-1 class [Ensembl]. Putative helicase, Putative conjugal transfer nickase/helicase TraI C-term [Interproscan].


Gene families : OG_02_0002007 (OrthoFinder) Phylogenetic Tree(s): OG0002007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN77147
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AGT22623 N559_0833 hypothetical protein [Ensembl]. Putative helicase,... 0.05 OrthoFinder
CRN66462 No alias integrating conjugative element relaxase, PFGI-1 class... 0.09 OrthoFinder
EDJ90703 CGSHi22421_00025 hypothetical protein [Ensembl]. Putative helicase,... 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006878 cellular copper ion homeostasis IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011119 Unchr_helicase_relaxase_TraI 26 338
IPR011093 TraI_2_C 480 603
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_00523