CRN77914 (cusR)

Aliases : cusR

Description : Transcriptional regulatory protein CusR [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRN77914
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.01	OrthoFinder
AAK99910	spr1107, rr02	Response regulator [Ensembl]. Transcriptional regulatory...	0.02	OrthoFinder
AAL22364	STM3502, ompR	response regulator in two-component regulatory system...	0.02	OrthoFinder
AGT26862	N559_5288	Transcriptional regulatory protein pcoR [Ensembl]....	0.07	OrthoFinder
AGT26875	N559_5301, CusR	DNA-binding transcriptional activator CusR [Ensembl]....	0.07	OrthoFinder
CBI67093	HPB8_1536	two-component system, OmpR family, response regulator...	0.02	OrthoFinder
CCG27642	No alias	Two-component response regulator SA14-24 [Ensembl]....	0.02	OrthoFinder
CCL17829	vanR, BN171_1830003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.01	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Enrichment
BP	GO:0006310	DNA recombination	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006878	cellular copper ion homeostasis	IEP	Enrichment
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Enrichment
BP	GO:0009085	lysine biosynthetic process	IEP	Enrichment
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Enrichment
BP	GO:0009116	nucleoside metabolic process	IEP	Enrichment
CC	GO:0009279	cell outer membrane	IEP	Enrichment
BP	GO:0010035	response to inorganic substance	IEP	Enrichment
BP	GO:0010038	response to metal ion	IEP	Enrichment
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
BP	GO:0042221	response to chemical	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
BP	GO:0046451	diaminopimelate metabolic process	IEP	Enrichment
BP	GO:0046688	response to copper ion	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
BP	GO:0055070	copper ion homeostasis	IEP	Enrichment
BP	GO:1901657	glycosyl compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	4	113
IPR001867	OmpR/PhoB-type_DNA-bd	146	221

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_00557

CRN77914 (cusR)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation