CRN79690 (gbpR_1)


Aliases : gbpR_1

Description : Galactose-binding protein regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRN79690

Target Alias Description ECC score Gene Family Method Actions
AAC75458 xapR, b2405 transcriptional activator of xapAB [Ensembl]. LysR... 0.03 OrthoFinder
AAL21469 STM2575 putative LysR family transcriptional regulator... 0.03 OrthoFinder
AKI50286 L2625_02454 transcriptional regulator, LysR family [Ensembl]. LysR,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0005275 amine transmembrane transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0015101 organic cation transmembrane transporter activity IEP Enrichment
MF GO:0015665 alcohol transmembrane transporter activity IEP Enrichment
BP GO:0015695 organic cation transport IEP Enrichment
BP GO:0015837 amine transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0034228 ethanolamine transmembrane transporter activity IEP Enrichment
BP GO:0034229 ethanolamine transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 103 308
IPR000847 Tscrpt_reg_HTH_LysR 16 75