CRN81682 (dmlR_2)

Aliases : dmlR_2

Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRN81682
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC74869 dmlR, b1799 transcriptional activator of dmlA [Ensembl]. LysR... 0.03 OrthoFinder
AAL19287 STM0333 putative LysR family transcriptional regulator... 0.03 OrthoFinder
AAL21792 STM2912 putative LysR family transcriptional regulator... 0.02 OrthoFinder
AGT24929 N559_3271 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT25823 N559_4198 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
CRO76276 dmlR_20 D-malate degradation protein R [Ensembl]. LysR substrate... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
CC GO:0009428 bacterial-type flagellum basal body, distal rod, P ring IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 6 62
IPR005119 LysR_subst-bd 88 290