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CRO00991 (opuCB_1)


Aliases : opuCB_1

Description : Glycine betaine/carnitine/choline transport system permease protein OpuCB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO00991
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC75191 yehY, b2130 putative ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC75192 osmF, b2131 putative ABC transporter periplasmic binding protein... 0.05 OrthoFinder
AAL20412 STM1493 putative periplasmic component [Ensembl]. Substrate... 0.03 OrthoFinder
AAL21069 STM2165, yehZ putative ABC superfamily transport protein (bind_prot)... 0.07 OrthoFinder
AGT23431 N559_1689 glycine betaine/choline ABC transporter membrane protein... 0.07 OrthoFinder
CCL17066 opuCC, BN171_1180002 ABC-type transport system, glycine... 0.04 OrthoFinder
CCL19669 BN171_3370003 ABC-type transport system, glycine... 0.03 OrthoFinder
CPD18769 opuCB, ERS093114_02235 Osmotically activated L-carnitine/choline ABC... 0.04 OrthoFinder
CPD18810 opuCC_2, ERS093114_02236 Osmotically activated L-carnitine/choline ABC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 37 213
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01238