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CRO09488 (bepF_1)


Aliases : bepF_1

Description : Efflux pump periplasmic linker BepF [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO09488
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AAC76297 acrE, b3265 cytoplasmic membrane lipoprotein [Ensembl]. HlyD... 0.03 OrthoFinder
AAC76538 mdtE, b3513 anaerobic multidrug efflux transporter, ArcA-regulated... 0.04 OrthoFinder
AAL21030 STM2126 putative HlyD family secretion protein [Ensembl].... 0.04 OrthoFinder
AAL22259 STM3390, acrE transmembrane protein affecting septum formation and... 0.02 OrthoFinder
AGT25400 N559_3764, HlyD putative secretion protein HlyD [Ensembl].... 0.05 OrthoFinder
AHY39623 CJ8421_01840 RND efflux system, membrane fusion protein CmeA... 0.05 OrthoFinder
AKP14429 mexA, WX61_00347 Multidrug resistance protein MexA precursor [Ensembl].... 0.06 OrthoFinder
CBI66362 HPB8_805 conserved hypothetical protein [Ensembl]. Biotin-lipoyl... 0.02 OrthoFinder
CRN65192 acrA Acriflavine resistance protein A precursor [Ensembl].... 0.08 OrthoFinder
CRO58950 bepF_2 Efflux pump periplasmic linker BepF [Ensembl].... 0.03 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.12 OrthoFinder
CRP32469 mdtA_3 Multidrug transporter MdtA [Ensembl]. Biotin-lipoyl... 0.06 OrthoFinder
CRP65706 bepF_3 Efflux pump periplasmic linker BepF [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR032317 HlyD_D23 62 286
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01478