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CRO12288 (potB_1)


Aliases : potB_1

Description : Spermidine/putrescine transport system permease protein PotB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000265 (OrthoFinder) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO12288
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AAC73943 potH, b0856 putrescine ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC74209 potB, b1125 spermidine/putrescine ABC transporter permease... 0.03 OrthoFinder
AAL19815 STM0879, potH putrescine transporter [Ensembl].... 0.04 OrthoFinder
AEA94710 potB, OG1RF_12023 spermidine/putrescine ABC superfamily ATP binding... 0.02 OrthoFinder
AGT24824 N559_3164 spermidine/putrescine ABC transporter membrane protein... 0.03 OrthoFinder
AKI48758 potB, L2625_00829 spermidine/putrescine ABC transporter, permease protein... 0.04 OrthoFinder
AKP15567 potH, WX61_01527 Putrescine transport system permease protein PotH... 0.03 OrthoFinder
CCL17169 potB, BN171_1330030 ABC-type transport system,spermidine/putrescine permease... 0.03 OrthoFinder
CPC39960 potB, ERS093114_00324 Spermidine Putrescine ABC transporter permease component... 0.02 OrthoFinder
CRO82794 potH_1 Putrescine transport system permease protein PotH... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 96 286
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01564