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CRO12353 (potF_3)


Aliases : potF_3

Description : Putrescine-binding periplasmic protein precursor [Ensembl]. Bacterial extracellular solute-binding protein [Interproscan].


Gene families : OG_02_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO12353
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AAL00047 spr1243, potD ABC transporter substrate-binding... 0.03 OrthoFinder
AAL19813 STM0877, potF ABC superfamily (peri_perm), putrescine transporter... 0.04 OrthoFinder
AEA94708 potD, OG1RF_12021 spermidine/putrescine ABC superfamily ATP binding... 0.06 OrthoFinder
AGT25047 N559_3395 putrescine transporter subunit: periplasmic-binding... 0.03 OrthoFinder
AKI48760 potD, L2625_00831 spermidine/putrescine ABC transporter, substrate-binding... 0.04 OrthoFinder
CPC39899 potD, ERS093114_00322 ABC transporter%2C periplasmic spermidine... 0.1 OrthoFinder
KNA57821 VCV51_032790 bacterial extracellular solute-binding protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004594 pantothenate kinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR006059 SBP 38 317
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01566