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Aliases : rpfG_1
Description : Cyclic di-GMP phosphodiesterase response regulator RpfG [Ensembl]. HD domain, Response regulator receiver domain [Interproscan].
Gene families : OG_02_0001255 (OrthoFinder) Phylogenetic Tree(s): OG0001255_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRO19803 | |
| Cluster | HCCA: Cluster_21 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| KNA53008 | VCV51_031567 | HD domain-containing protein [Ensembl]. HD domain [Interproscan]. | 0.04 | OrthoFinder | |
| KNA55674 | VCV51_030989 | response regulator receiver domain-containing protein... | 0.05 | OrthoFinder | |
| KNA59965 | VCV51_032377 | HD domain-containing protein [Ensembl]. HD domain [Interproscan]. | 0.04 | OrthoFinder | |
| KNA60768 | VCV51_032030 | HD domain-containing protein [Ensembl]. HD domain,... | 0.05 | OrthoFinder | |
| KNA60998 | VCV51_031973 | HD domain-containing protein [Ensembl]. HD domain [Interproscan]. | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0004057 | arginyltransferase activity | IEP | Enrichment |
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | Enrichment |
| MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| MF | GO:0005507 | copper ion binding | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006544 | glycine metabolic process | IEP | Enrichment |
| BP | GO:0006546 | glycine catabolic process | IEP | Enrichment |
| BP | GO:0006935 | chemotaxis | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Enrichment |
| MF | GO:0015002 | obsolete heme-copper terminal oxidase activity | IEP | Enrichment |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| BP | GO:0016598 | protein arginylation | IEP | Enrichment |
| MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0042330 | taxis | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001789 | Sig_transdc_resp-reg_receiver | 13 | 124 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_01752 |