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CRO25153 (rpfG_2)


Aliases : rpfG_2

Description : Cyclic di-GMP phosphodiesterase response regulator RpfG [Ensembl]. HD domain, Domain of unknown function (DUF3391) [Interproscan].


Gene families : OG_02_0001255 (OrthoFinder) Phylogenetic Tree(s): OG0001255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO25153
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
KNA53008 VCV51_031567 HD domain-containing protein [Ensembl]. HD domain [Interproscan]. 0.04 OrthoFinder
KNA55674 VCV51_030989 response regulator receiver domain-containing protein... 0.04 OrthoFinder
KNA59965 VCV51_032377 HD domain-containing protein [Ensembl]. HD domain [Interproscan]. 0.04 OrthoFinder
KNA60768 VCV51_032030 HD domain-containing protein [Ensembl]. HD domain,... 0.05 OrthoFinder
KNA60998 VCV51_031973 HD domain-containing protein [Ensembl]. HD domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR021812 DUF3391 1 112
IPR006674 HD_domain 145 266
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_01906