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CRO28822 (gmr_4)


Aliases : gmr_4

Description : Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. EAL domain, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO28822
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AAC73920 pdeI, b0833 putative membrane-anchored cyclic-di-GMP... 0.04 OrthoFinder
AAC74367 pdeR, b1285 cyclic-di-GMP phosphodiesterase; csgD regulator;... 0.03 OrthoFinder
CCL17607 BN171_1610003 Putative diguanylate kinase signaling protein [Ensembl].... 0.05 OrthoFinder
CCL17821 BN171_1820001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CCL19368 BN171_3080015 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA53622 VCV51_030093 EAL domain-containing protein [Ensembl]. EAL domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 1 84
IPR001633 EAL_dom 108 343
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_02006