Aliases : adcA, OG1RF_10051
Description : metal ABC superfamily ATP binding cassette transporter, binding protein [Ensembl]. Zinc-uptake complex component A periplasmic [Interproscan].
Gene families : OG_02_0000138 (OrthoFinder) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA92738 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AGT22925 | N559_1156 | iron ABC superfamily ATP binding cassette transporter,... | 0.03 | OrthoFinder | |
AGT22970 | N559_1204 | putative periplasmic solute binding protein [Ensembl]. | 0.02 | OrthoFinder | |
AGT23620 | N559_1887 | high-affinity zinc transporter periplasmic component [Ensembl]. | 0.02 | OrthoFinder | |
AGT26612 | N559_5035 | hypothetical protein [Ensembl]. ZinT domain [InterProScan]. | 0.02 | OrthoFinder | |
AKI48122 | L2625_00149 | zinc ABC transporter, zinc-binding protein, lipoprotein... | 0.03 | OrthoFinder | |
CPC53251 | psaA, ERS093114_00722 | ABC transporter substrate-binding protein [Ensembl].... | 0.03 | OrthoFinder | |
CRO76599 | psaA | Pneumococcal surface adhesin A [Ensembl]. Zinc-uptake... | 0.02 | OrthoFinder | |
CRP72811 | znuA | High-affinity zinc uptake system protein ZnuA precursor... | 0.02 | OrthoFinder | |
EDJ90089 | CGSHi22421_06583 | putative periplasmic chelated iron binding protein... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0030001 | metal ion transport | IEA | Interproscan |
MF | GO:0046872 | metal ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001216 | DNA-binding transcription activator activity | IEP | Enrichment |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
MF | GO:0004565 | beta-galactosidase activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
CC | GO:0009341 | beta-galactosidase complex | IEP | Enrichment |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015925 | galactosidase activity | IEP | Enrichment |
CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006127 | ZnuA-like | 39 | 314 |
No external refs found! |