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CRO42652 (dmlR_14)


Aliases : dmlR_14

Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: CRO42652

Target Alias Description ECC score Gene Family Method Actions
AAL19887 STM0952 putative transcriptional regulator, lysR family... 0.03 OrthoFinder
AAL22236 STM3367, yhcS putative LysR family transcriptional regulator... 0.06 OrthoFinder
AGT22104 N559_0282 putative LysR-family transcriptional regulator... 0.01 OrthoFinder
AGT22561 N559_0770 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT22715 N559_0927 LysR family transcriptional regulator protein [Ensembl].... 0.02 OrthoFinder
AGT22904 N559_1134 putative LysR-family transcriptional regulator... 0.01 OrthoFinder
AGT24568 N559_2901 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT24866 N559_3206 LysR substrate binding domain protein [Ensembl]. LysR... 0.02 OrthoFinder
AGT24894 N559_3234 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT24929 N559_3271 putative LysR-family transcriptional regulator... 0.01 OrthoFinder
AGT26014 N559_4407 putative HTH-type transcriptional regulator [Ensembl].... 0.01 OrthoFinder
CRN86190 dmlR_3 D-malate degradation protein R [Ensembl]. LysR substrate... 0.07 OrthoFinder
CRO10861 dmlR_7 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
CRO40258 dmlR_13 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
CRO43057 dmlR_15 D-malate degradation protein R [Ensembl]. LysR substrate... 0.08 OrthoFinder
CRP22590 dmlR_24 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
CRP37683 dmlR_29 D-malate degradation protein R [Ensembl]. LysR substrate... 0.06 OrthoFinder
CRP53621 dmlR_30 D-malate degradation protein R [Ensembl]. LysR substrate... 0.12 OrthoFinder
CRP78779 dmlR_35 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
EDJ90555 CGSHi22421_03258 DNA topoisomerase I [Ensembl]. LysR substrate binding... 0.01 OrthoFinder
KNA55708 VCV51_031016 LysR substrate binding domain-containing protein... 0.01 OrthoFinder
KNA59855 VCV51_032266 LysR substrate binding domain-containing protein... 0.02 OrthoFinder
KNA59858 VCV51_032269 LysR substrate binding domain-containing protein... 0.01 OrthoFinder
KNA59999 VCV51_032411 LysR substrate binding domain-containing protein... 0.02 OrthoFinder
KNA60706 VCV51_032145 LysR substrate binding domain-containing protein... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 87 286
IPR000847 Tscrpt_reg_HTH_LysR 7 62
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_02385