CRO43121 (cmpR_1)

Aliases : cmpR_1

Description : HTH-type transcriptional activator CmpR [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CRO43121
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AAL20406 STM1487, ynfL putative LysR family transcriptional regulator... 0.04 OrthoFinder
AAL21105 STM2201, yeiE putative LysR family transcriptional regulator... 0.03 OrthoFinder
AAL21318 STM2424, yfeR putative LysR family transcriptional regulator... 0.03 OrthoFinder
AGT23255 N559_1502 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT23273 N559_1520, CynR DNA-binding transcriptional regulator CynR [Ensembl].... 0.02 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.03 OrthoFinder
AGT24793 N559_3132 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
CRO80200 cynR_3 Cyn operon transcriptional activator [Ensembl]. LysR... 0.04 OrthoFinder
CRP00540 cysL_3 CysJI operon transcriptional activator [Ensembl]. LysR... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 62
IPR005119 LysR_subst-bd 87 288