CRO45700 (clpB_3)

Aliases : clpB_3

Description : Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO45700
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AAL19228	STM0272	putative ATPase with chaperone activity [Ensembl]....	0.06	OrthoFinder
AGT24590	N559_2925	putative protease [Ensembl]. AAA lid domain, Clp amino...	0.06	OrthoFinder
CRO78663	clpB_4	Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.08	OrthoFinder
CRP27033	clpB_5	Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0006783	heme biosynthetic process	IEP	Enrichment
BP	GO:0006784	heme A biosynthetic process	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0042440	pigment metabolic process	IEP	Enrichment
BP	GO:0046148	pigment biosynthetic process	IEP	Enrichment
BP	GO:0046160	heme a metabolic process	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041546	ClpA/ClpB_AAA_lid	360	453
IPR003959	ATPase_AAA_core	220	332
IPR004176	Clp_R_dom	21	71
IPR019489	Clp_ATPase_C	781	848
IPR003959	ATPase_AAA_core	611	775

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_02475

CRO45700 (clpB_3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation