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CRO47021 (rpmF)


Aliases : rpmF

Description : 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p protein family [Interproscan].


Gene families : OG_02_0000435 (OrthoFinder) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO47021
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC74173 rpmF, b1089 50S ribosomal subunit protein L32 [Ensembl]. Ribosomal... 0.15 OrthoFinder
AAL00745 spr1943, rpmF 50S Ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.1 OrthoFinder
AKI50042 rpmF-2, L2625_02197 ribosomal protein L32p [Ensembl]. Ribosomal protein L32p... 0.07 OrthoFinder
AKP15316 rpmF, WX61_01267 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.12 OrthoFinder
CCG27568 No alias LSU ribosomal protein L32p [Ensembl]. Ribosomal L32p... 0.07 OrthoFinder
CCL17328 rpmF, BN171_1440012 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.03 OrthoFinder
CPC39148 rpmF, ERS093114_00298 50S ribosomalprotein L32p [Ensembl]. Ribosomal L32p... 0.1 OrthoFinder
EDJ90564 rpmF, CGSHi22421_01127 50S ribosomal protein L32 [Ensembl]. Ribosomal L32p... 0.02 OrthoFinder
KNA59659 VCV51_032545 ribosomal protein L32 [Ensembl]. Ribosomal L32p protein... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0015886 heme transport IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901678 iron coordination entity transport IEP Enrichment
InterPro domains Description Start Stop
IPR002677 Ribosomal_L32p 2 56
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_02512