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Aliases : rocC
Description : Amino-acid permease RocC [Ensembl]. Amino acid permease [Interproscan].
Gene families : OG_02_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRO55488 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75710 | gabP, b2663 | gamma-aminobutyrate transporter [Ensembl]. Amino acid... | 0.03 | OrthoFinder | |
| AAL19114 | STM0150, aroP | APC family aromatic amino acid transporter [Ensembl].... | 0.03 | OrthoFinder | |
| AAL21678 | STM2793, gabP | RpoS dependent gamma-aminobutyrate transport protein... | 0.02 | OrthoFinder | |
| AGT24504 | N559_2833 | D-alanine/D-serine/glycine transport protein [Ensembl].... | 0.03 | OrthoFinder | |
| AGT25695 | N559_4069 | putative proline-specific permease [Ensembl]. Amino acid... | 0.03 | OrthoFinder | |
| AGT25729 | N559_4103 | S-methylmethionine transporter [Ensembl]. Amino acid... | 0.03 | OrthoFinder | |
| AGT25927 | N559_4312 | aromatic amino acid transporter [Ensembl]. Amino acid... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Enrichment |
| MF | GO:0004620 | phospholipase activity | IEP | Enrichment |
| MF | GO:0004629 | phospholipase C activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015696 | ammonium transport | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016298 | lipase activity | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | Enrichment |
| CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Enrichment |
| CC | GO:1904949 | ATPase complex | IEP | Enrichment |
| CC | GO:1990351 | transporter complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004841 | AA-permease/SLC12A_dom | 18 | 452 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_02777 |