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Aliases : bepF_2
Description : Efflux pump periplasmic linker BepF [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan].
Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRO58950 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL22259 | STM3390, acrE | transmembrane protein affecting septum formation and... | 0.04 | OrthoFinder | |
| AGT23031 | N559_1267, HlyD | putative secretion protein HlyD [Ensembl]. biotin-lipoyl... | 0.04 | OrthoFinder | |
| AGT25400 | N559_3764, HlyD | putative secretion protein HlyD [Ensembl].... | 0.03 | OrthoFinder | |
| AGT25592 | N559_3957 | acridine efflux pump [Ensembl]. Barrel-sandwich domain... | 0.03 | OrthoFinder | |
| AHY39623 | CJ8421_01840 | RND efflux system, membrane fusion protein CmeA... | 0.02 | OrthoFinder | |
| AKP14429 | mexA, WX61_00347 | Multidrug resistance protein MexA precursor [Ensembl].... | 0.03 | OrthoFinder | |
| CRO09488 | bepF_1 | Efflux pump periplasmic linker BepF [Ensembl].... | 0.03 | OrthoFinder | |
| CRO88312 | mexA_1 | Multidrug resistance protein MexA precursor [Ensembl].... | 0.04 | OrthoFinder | |
| CRP32469 | mdtA_3 | Multidrug transporter MdtA [Ensembl]. Biotin-lipoyl... | 0.02 | OrthoFinder | |
| CRP65706 | bepF_3 | Efflux pump periplasmic linker BepF [Ensembl].... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000746 | conjugation | IEP | Enrichment |
| BP | GO:0001897 | cytolysis by symbiont of host cells | IEP | Enrichment |
| BP | GO:0001906 | cell killing | IEP | Enrichment |
| BP | GO:0001907 | killing by symbiont of host cells | IEP | Enrichment |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008830 | dTDP-4-dehydrorhamnose 3,5-epimerase activity | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009291 | unidirectional conjugation | IEP | Enrichment |
| BP | GO:0009292 | genetic transfer | IEP | Enrichment |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Enrichment |
| BP | GO:0017000 | antibiotic biosynthetic process | IEP | Enrichment |
| BP | GO:0017144 | drug metabolic process | IEP | Enrichment |
| BP | GO:0019835 | cytolysis | IEP | Enrichment |
| BP | GO:0019836 | hemolysis by symbiont of host erythrocytes | IEP | Enrichment |
| BP | GO:0030258 | lipid modification | IEP | Enrichment |
| BP | GO:0030259 | lipid glycosylation | IEP | Enrichment |
| BP | GO:0031640 | killing of cells of other organism | IEP | Enrichment |
| BP | GO:0044179 | hemolysis in other organism | IEP | Enrichment |
| BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | Enrichment |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0051701 | biological process involved in interaction with host | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0051715 | cytolysis in other organism | IEP | Enrichment |
| BP | GO:0051801 | cytolysis in other organism involved in symbiotic interaction | IEP | Enrichment |
| BP | GO:0051883 | killing of cells in other organism involved in symbiotic interaction | IEP | Enrichment |
| BP | GO:0052331 | hemolysis in other organism involved in symbiotic interaction | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032317 | HlyD_D23 | 66 | 267 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_02862 |