CRO66896 (rpmI)

Aliases : rpmI

Description : Ribosomal protein A [Ensembl]. Ribosomal protein L35 [Interproscan].

Gene families : OG_02_0000431 (OrthoFinder) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRO66896
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AAC74787	rpmI, b1717	50S ribosomal subunit protein L35 [Ensembl]. Ribosomal...	0.04	OrthoFinder
AGT23822	N559_2104	50S ribosomal protein L35 [Ensembl].	0.04	OrthoFinder
AHY39504	rpmI, CJ8421_01205	50S ribosomal protein L35 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
AKP15672	rpmI, WX61_01635	50S ribosomal protein L35 [Ensembl]. Ribosomal protein...	0.04	OrthoFinder
CCG26516	No alias	LSU ribosomal protein L35p [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
CCP44407	rpmI, Rv1642	50S ribosomal protein L35 RpmI [Ensembl]. Ribosomal...	0.04	OrthoFinder
CPC85871	rpmI, ERS093114_01501	50S ribosomal protein L35 [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
KNA52215	VCV51_033473	ribosomal protein L35 [Ensembl]. Ribosomal protein L35...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0015934	large ribosomal subunit	IEP	Enrichment
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
CC	GO:0044391	ribosomal subunit	IEP	Enrichment
CC	GO:1990904	ribonucleoprotein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR021137	Ribosomal_L35	2	60

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_03094

CRO66896 (rpmI)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation