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Description : Helix-turn-helix domain protein [Ensembl]. Helix-turn-helix domain [Interproscan].
Gene families : OG_02_0005355 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRO71333 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| CRN63823 | No alias | transcriptional regulator, y4mF family [Ensembl]. | 0.15 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0000746 | conjugation | IEP | Enrichment |
| BP | GO:0002376 | immune system process | IEP | Enrichment |
| MF | GO:0003978 | UDP-glucose 4-epimerase activity | IEP | Enrichment |
| MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Enrichment |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0006955 | immune response | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0008653 | lipopolysaccharide metabolic process | IEP | Enrichment |
| MF | GO:0009036 | type II site-specific deoxyribonuclease activity | IEP | Enrichment |
| BP | GO:0009103 | lipopolysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0009291 | unidirectional conjugation | IEP | Enrichment |
| BP | GO:0009292 | genetic transfer | IEP | Enrichment |
| BP | GO:0009307 | DNA restriction-modification system | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| MF | GO:0015109 | chromate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015666 | restriction endodeoxyribonuclease activity | IEP | Enrichment |
| BP | GO:0015703 | chromate transport | IEP | Enrichment |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Enrichment |
| MF | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Enrichment |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Enrichment |
| BP | GO:0030255 | protein secretion by the type IV secretion system | IEP | Enrichment |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Enrichment |
| BP | GO:0044097 | secretion by the type IV secretion system | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0044355 | clearance of foreign intracellular DNA | IEP | Enrichment |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0051707 | response to other organism | IEP | Enrichment |
| BP | GO:0098542 | defense response to other organism | IEP | Enrichment |
| BP | GO:0099046 | clearance of foreign intracellular nucleic acids | IEP | Enrichment |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
No InterPro domains available for this sequence
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_03225 |