AEA92863 (rpsK, OG1RF_10176)

Aliases : rpsK, OG1RF_10176

Description : 30S ribosomal protein S11 [Ensembl]. Ribosomal protein S11 [Interproscan].

Gene families : OG_02_0000561 (OrthoFinder) Phylogenetic Tree(s): OG0000561_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AEA92863
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AAC76322	rpsK, b3297	30S ribosomal subunit protein S11 [Ensembl]. Ribosomal...	0.31	OrthoFinder
AAK99018	spr0214, rpsK	30S Ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.24	OrthoFinder
AAL22280	STM3417, rpsK	30S ribosomal subunit protein S11 [Ensembl]. Ribosomal...	0.32	OrthoFinder
ADK86660	rpsK, MPNE_0219	30S ribosomal protein S11 [Ensembl].	0.21	OrthoFinder
AHY40766	CJ8421_07970	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.15	OrthoFinder
AKI50542	rpsK, L2625_02752	ribosomal protein S11 [Ensembl]. Ribosomal protein S11...	0.28	OrthoFinder
CBI65741	rpsK, HPB8_184	small subunit ribosomal protein S11 [Ensembl]. Ribosomal...	0.17	OrthoFinder
CCG27404	No alias	SSU ribosomal protein S11p (S14e) [Ensembl]. Ribosomal...	0.19	OrthoFinder
CCL20589	rpsK, BN171_70029	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.29	OrthoFinder
CCP46281	rpsK, Rv3459c	30S ribosomal protein S11 RpsK [Ensembl]. Ribosomal...	0.21	OrthoFinder
CPD14353	rpsK, ERS093114_02147	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.43	OrthoFinder
CRO74429	rpsK	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.28	OrthoFinder
EDJ91379	CGSHi22421_04728	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.2	OrthoFinder
KNA54995	VCV51_033178	30S ribosomal protein S11 [Ensembl]. Ribosomal protein...	0.22	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003697	single-stranded DNA binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004017	adenylate kinase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006304	DNA modification	IEP	Enrichment
BP	GO:0006305	DNA alkylation	IEP	Enrichment
BP	GO:0006306	DNA methylation	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0008170	N-methyltransferase activity	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0044728	DNA methylation or demethylation	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	19	128

External Links

No external refs found!

AEA92863 (rpsK, OG1RF_10176)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation