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CRO92466 (ydcV_3)


Aliases : ydcV_3

Description : Inner membrane ABC transporter permease protein YdcV [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000276 (OrthoFinder) Phylogenetic Tree(s): OG0000276_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO92466
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AAC73944 potI, b0857 putrescine ABC transporter permease [Ensembl].... 0.17 OrthoFinder
AAC74208 potC, b1124 spermidine/putrescine ABC transporter permease... 0.03 OrthoFinder
AAL00048 spr1244, potC ABC transporter membrane-spanning... 0.02 OrthoFinder
AAL19816 STM0880, potI putrescine transporter [Ensembl].... 0.03 OrthoFinder
AEA93678 OG1RF_10991 spermidine/putrescine ABC superfamily ATP binding... 0.02 OrthoFinder
AEA94709 potC, OG1RF_12022 spermidine/putrescine ABC superfamily ATP binding... 0.01 OrthoFinder
AGT24825 N559_3165 spermidine/putrescine ABC transporter membrane protein... 0.03 OrthoFinder
AKI48759 potC, L2625_00830 spermidine/putrescine ABC transporter, permease protein... 0.02 OrthoFinder
CCG27581 No alias Spermidine Putrescine ABC transporter permease component... 0.02 OrthoFinder
CPC39929 ydcV, ERS093114_00323 PotC [Ensembl]. Binding-protein-dependent transport... 0.04 OrthoFinder
CRO12320 ydcV_1 Inner membrane ABC transporter permease protein YdcV... 0.07 OrthoFinder
CRO82760 ydcV_2 Inner membrane ABC transporter permease protein YdcV... 0.04 OrthoFinder
CRO93042 ydcV_4 Inner membrane ABC transporter permease protein YdcV... 0.33 OrthoFinder
KNA57822 VCV51_032791 binding-protein-dependent transport system inner... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016887 ATPase IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 75 262
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_03849