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CRO93456 (ydaM_1)


Aliases : ydaM_1

Description : putative diguanylate cyclase YdaM [Ensembl]. PAS fold, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO93456

Target Alias Description ECC score Gene Family Method Actions
AAC74110 dgcT, b1025 diguanylate cyclase, membrane-anchored [Ensembl].... 0.02 OrthoFinder
AGT23545 N559_1811 hypothetical protein [Ensembl]. GGDEF domain, GAF domain... 0.01 OrthoFinder
AGT24348 N559_2672 putative transport protein [Ensembl]. GGDEF domain... 0.02 OrthoFinder
AGT26071 N559_4466 putative transmembrane protein [Ensembl]. GGDEF domain... 0.04 OrthoFinder
AGT26512 N559_4928 hypothetical protein [Ensembl]. GGDEF domain, Cache... 0.01 OrthoFinder
CCL17140 BN171_1330001 Two-component sensor histidine kinase [Ensembl].... 0.01 OrthoFinder
CCL17159 BN171_1330020 Two-component sensor histidine kinase [Ensembl].... 0.01 OrthoFinder
CCL17605 BN171_1610001 Putative diguanylate kinase signaling protein [Ensembl].... 0.01 OrthoFinder
CCL17606 BN171_1610002 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL18642 BN171_2480017 Putative diguanylate kinase signaling protein [Ensembl].... 0.01 OrthoFinder
CCL19831 BN171_3520017 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder
CCL20093 BN171_3690037 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.01 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.01 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.02 OrthoFinder
CRP73142 pleD_6 Stalked cell differentiation-controlling protein... 0.03 OrthoFinder
KNA52750 VCV51_031533 GGDEF domain-containing protein [Ensembl]. CHASE4... 0.01 OrthoFinder
KNA53037 VCV51_031592 GGDEF domain-containing protein [Ensembl]. PAS fold, PAS... 0.02 OrthoFinder
KNA54690 VCV51_030775 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
KNA55353 VCV51_031045 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
KNA55677 VCV51_030992 GGDEF domain-containing protein [Ensembl]. Y_Y_Y domain,... 0.01 OrthoFinder
KNA55689 VCV51_031001 diguanylate cyclase domain-containing protein [Ensembl].... 0.01 OrthoFinder
KNA55692 VCV51_031003 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA55694 VCV51_031005 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
KNA55698 VCV51_031009 CHASE domain-containing protein [Ensembl]. CHASE domain,... 0.03 OrthoFinder
KNA56144 VCV51_032984 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
KNA59739 VCV51_032434 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.01 OrthoFinder
KNA59940 VCV51_032352 CHASE domain-containing protein [Ensembl]. CHASE domain,... 0.01 OrthoFinder
KNA59943 VCV51_032355 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA59959 VCV51_032371 GGDEF domain-containing protein [Ensembl]. PAS fold,... 0.01 OrthoFinder
KNA60713 VCV51_032152 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA60732 VCV51_032172 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.01 OrthoFinder
KNA60834 VCV51_032024 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
KNA61013 VCV51_031988 GGDEF domain-containing protein [Ensembl]. PAS domain,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR013655 PAS_fold_3 44 132
IPR000160 GGDEF_dom 190 338
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_03887