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CRO94804 (ycgF)


Aliases : ycgF

Description : Blue light-and temperature-regulated antirepressor YcgF [Ensembl]. CBS domain, EAL domain, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRO94804
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AAC74252 pdeG, b1168 putative membrane-anchored cyclic-di-GMP... 0.03 OrthoFinder
AAL22257 STM3388 putative membrane domain protein involved in signal... 0.03 OrthoFinder
CCL18073 BN171_210009 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL19125 BN171_2870055 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL19229 BN171_2970008 Putative signaling protein [Ensembl]. Diguanylate... 0.02 OrthoFinder
CCL19368 BN171_3080015 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CCP44112 Rv1354c Conserved hypothetical protein [Ensembl]. EAL domain,... 0.04 OrthoFinder
KNA51140 VCV51_033633 GGDEF domain-containing protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
KNA60571 VCV51_032242 EAL domain-containing protein [Ensembl]. EAL domain,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000644 CBS_dom 278 323
IPR000160 GGDEF_dom 406 505
IPR001633 EAL_dom 10 239
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_03927