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  5. CRP00540

CRP00540 (cysL_3)


Aliases : cysL_3

Description : CysJI operon transcriptional activator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP00540

Target Alias Description ECC score Gene Family Method Actions
AAC75049 cbl, b1987 ssuEADCB/tauABCD operon transcriptional activator... 0.02 OrthoFinder
AAC75050 nac, b1988 nitrogen assimilation regulon transcriptional regulator;... 0.02 OrthoFinder
AAC75590 hcaR, b2537 hca operon transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AEA94928 OG1RF_12241 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT22920 N559_1151 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AGT23181 N559_1423 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT23255 N559_1502 putative LysR-family transcriptional regulator... 0.02 OrthoFinder
AGT23273 N559_1520, CynR DNA-binding transcriptional regulator CynR [Ensembl].... 0.02 OrthoFinder
AGT23403 N559_1659 putative DNA-binding transcriptional regulator... 0.02 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.01 OrthoFinder
AGT23946 N559_2239 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT24322 N559_2646, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.03 OrthoFinder
AGT24425 N559_2752 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.1 OrthoFinder
AGT24793 N559_3132 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT26415 N559_4829 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT26606 N559_5029, OxyR DNA-binding transcriptional regulator OxyR [Ensembl].... 0.02 OrthoFinder
AGT26618 N559_5041 putative LysR-family transcriptional regulator... 0.02 OrthoFinder
CCG27094 MtaR Methionine biosynthesis and transport regulator MtaR,... 0.01 OrthoFinder
CCL19137 BN171_2880004 Transcriptional regulator, LysR family [Ensembl]. LysR... 0.02 OrthoFinder
CRN91471 yofA_1 HTH-type transcriptional regulator YofA [Ensembl]. LysR... 0.08 OrthoFinder
CRO06947 cysB Cys regulon transcriptional activator [Ensembl]. LysR... 0.04 OrthoFinder
CRO11818 benM_2 Ben and cat operon transcriptional regulator [Ensembl].... 0.03 OrthoFinder
CRO37348 benM_3 Ben and cat operon transcriptional regulator [Ensembl].... 0.11 OrthoFinder
CRO43121 cmpR_1 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.06 OrthoFinder
CRO80200 cynR_3 Cyn operon transcriptional activator [Ensembl]. LysR... 0.08 OrthoFinder
CRP01952 cmpR_2 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.12 OrthoFinder
CRP03013 gltC_5 HTH-type transcriptional regulator GltC [Ensembl]. LysR... 0.06 OrthoFinder
CRP53545 cynR_8 Cyn operon transcriptional activator [Ensembl]. LysR... 0.11 OrthoFinder
EDJ90672 cysB, CGSHi22421_04163 transcriptional regulator CysB [Ensembl]. LysR substrate... 0.01 OrthoFinder
KNA59752 VCV51_032447 lysR family Bacterial regulatory helix-turn-helix... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 5 64
IPR005119 LysR_subst-bd 88 293
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_04099