CRP03424 (mcpB_4)

Aliases : mcpB_4

Description : hypothetical protein [Ensembl]. HAMP domain, Methyl-accepting chemotaxis protein (MCP) signalling domain [Interproscan].

Gene families : OG_02_0000014 (OrthoFinder) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP03424
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
CRP27512	trg_1	Ribose and galactose chemoreceptor protein [Ensembl]....	0.03	OrthoFinder
KNA49654	VCV51_030210	methyl-accepting chemotaxis protein [Ensembl]. HAMP...	0.04	OrthoFinder
KNA50318	VCV51_031442	vibrio chemotaxis protein [Ensembl]. HAMP domain, Cache...	0.04	OrthoFinder
KNA53598	VCV51_030075	methyl-accepting chemotaxis protein [Ensembl]. PAS fold,...	0.04	OrthoFinder
KNA55642	VCV51_030959	methyl-accepting chemotaxis protein [Ensembl]. HAMP...	0.06	OrthoFinder
KNA58622	VCV51_031090	methyl-accepting chemotaxis protein [Ensembl]. HAMP...	0.04	OrthoFinder
KNA59421	VCV51_031284	methyl-accepting chemotaxis protein [Ensembl]. HAMP...	0.03	OrthoFinder
KNA60014	VCV51_032426	methyl-accepting chemotaxis protein [Ensembl]. PAS fold,...	0.03	OrthoFinder
KNA60583	VCV51_032254	methyl-accepting chemotaxis protein [Ensembl]. HAMP...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
CC	GO:0016021	integral component of membrane	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
MF	GO:0008134	transcription factor binding	IEP	Enrichment
MF	GO:0008745	N-acetylmuramoyl-L-alanine amidase activity	IEP	Enrichment
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:0044780	bacterial-type flagellum assembly	IEP	Enrichment
BP	GO:0044781	bacterial-type flagellum organization	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003660	HAMP_dom	157	205
IPR004089	MCPsignal_dom	297	456

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_04184