Aliases : cmpR_4
Description : HTH-type transcriptional activator CmpR [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRP05348 | |
Cluster | HCCA: Cluster_28 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC75590 | hcaR, b2537 | hca operon transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AEA94928 | OG1RF_12241 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.02 | OrthoFinder | |
AGT23447 | N559_1705 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.02 | OrthoFinder | |
AGT24322 | N559_2646, LysR | transcriptional regulator LysR [Ensembl]. LysR substrate... | 0.03 | OrthoFinder | |
AGT24668 | N559_3005, CysB | transcriptional regulator CysB [Ensembl]. LysR substrate... | 0.04 | OrthoFinder | |
AGT26415 | N559_4829 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.02 | OrthoFinder | |
AKI48437 | L2625_00496 | transcriptional regulator, LysR family [Ensembl].... | 0.02 | OrthoFinder | |
AKI50144 | L2625_02308 | transcriptional regulator, LysR family [Ensembl]. LysR,... | 0.02 | OrthoFinder | |
CRP67092 | catM_2 | Cat operon transcriptional regulator [Ensembl]. LysR... | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_04245 |