CRP05348 (cmpR_4)


Aliases : cmpR_4

Description : HTH-type transcriptional activator CmpR [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP05348
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAC75590 hcaR, b2537 hca operon transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AEA94928 OG1RF_12241 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT23447 N559_1705 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AGT24322 N559_2646, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.03 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.04 OrthoFinder
AGT26415 N559_4829 LysR family transcriptional regulator [Ensembl]. LysR... 0.02 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.02 OrthoFinder
AKI50144 L2625_02308 transcriptional regulator, LysR family [Ensembl]. LysR,... 0.02 OrthoFinder
CRP67092 catM_2 Cat operon transcriptional regulator [Ensembl]. LysR... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 94 298
IPR000847 Tscrpt_reg_HTH_LysR 10 69