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  5. CRP12152

CRP12152 (dppB)


Aliases : dppB

Description : Dipeptide transport system permease protein DppB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP12152
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AAC73918 gsiC, b0831 glutathione ABC transporter permease [Ensembl].... 0.11 OrthoFinder
AAC74326 oppB, b1244 oligopeptide ABC transporter permease [Ensembl].... 0.1 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.14 OrthoFinder
AAC76502 nikB, b3477 nickel ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.15 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.04 OrthoFinder
AAL19786 STM0850, yliC putative ABC transporter periplasmic binding protein... 0.07 OrthoFinder
AAL20182 STM1256 putative ABC transporter [Ensembl].... 0.03 OrthoFinder
AAL20610 STM1693, sapB ABC superfamily peptide transport protein [Ensembl].... 0.06 OrthoFinder
AAL20663 STM1745, oppB oligopeptide transport protein [Ensembl].... 0.04 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.03 OrthoFinder
AEA93323 opp1B, OG1RF_10636 oligopeptide ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.09 OrthoFinder
AGT22074 N559_0252, DppB dipeptide transporter permease DppB [Ensembl].... 0.05 OrthoFinder
AGT22122 N559_0303, NikB nickel transporter permease NikB [Ensembl].... 0.04 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.06 OrthoFinder
AGT23803 N559_2085 oligopeptide transporter permease [Ensembl].... 0.04 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.06 OrthoFinder
AGT25118 N559_3467 peptide ABC transporter membrane protein [Ensembl].... 0.05 OrthoFinder
AGT25384 N559_3746 putative ABC transport system permease component... 0.02 OrthoFinder
AGT26720 N559_5146, GsiC putative glutathione ABC transporter, permease protein... 0.04 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.13 OrthoFinder
AKI50193 oppB, L2625_02359 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CBI65786 oppB, HPB8_229 peptide/nickel transport system permease protein... 0.03 OrthoFinder
CBI66820 dppB, HPB8_1263 dipeptide ABC transporter, permease protein (DppB)... 0.08 OrthoFinder
CCG26341 OppB Oligopeptide transport system permease protein OppB (TC... 0.06 OrthoFinder
CCL17022 oppB, BN171_1090003 ABC-type transport system, oligopeptide-family permease... 0.02 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.04 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.05 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.03 OrthoFinder
CPC43653 oppB_1, ERS093114_00435 Oligopeptide transport system permease protein oppB... 0.03 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.12 OrthoFinder
CPC72096 opp-3B, ERS093114_01158 oligopeptide permease%2C channel-forming protein... 0.07 OrthoFinder
CPC95781 gsiC, ERS093114_01725 Oligopeptide transport system permease protein... 0.02 OrthoFinder
CPD17797 opp-1B, ERS093114_02217 Oligopeptide transporter putative membrane permease... 0.06 OrthoFinder
CRO32970 gsiC Glutathione transport system permease protein GsiC... 0.03 OrthoFinder
EDJ90656 CGSHi22421_04083 dipeptide transport system permease protein [Ensembl].... 0.02 OrthoFinder
EDJ90883 CGSHi22421_03503 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.04 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.09 OrthoFinder
KNA54678 VCV51_030764 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA58586 VCV51_031121 binding-protein-dependent transport system inner... 0.03 OrthoFinder
KNA60555 VCV51_032226 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0015627 type II protein secretion system complex IEP Enrichment
BP GO:0015628 protein secretion by the type II secretion system IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0098776 protein transport across the cell outer membrane IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 114 333
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_04477