CRP22422 (ybiS)


Aliases : ybiS

Description : putative L,D-transpeptidase YbiS precursor [Ensembl]. L [Interproscan].


Gene families : OG_02_0000888 (OrthoFinder) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP22422
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AAC74197 ldtC, b1113 L,D-transpeptidase linking Lpp to murein [Ensembl]. LysM... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR005490 LD_TPept_cat_dom 98 230