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CRP24283 (rsmD)


Aliases : rsmD

Description : Ribosomal RNA small subunit methyltransferase D [Ensembl]. Conserved hypothetical protein 95 [Interproscan].


Gene families : OG_02_0000649 (OrthoFinder) Phylogenetic Tree(s): OG0000649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP24283
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AAC76490 rsmD, b3465 16S rRNA m(2)G966 methyltransferase, SAM-dependent... 0.03 OrthoFinder
AHY40641 CJ8421_07320 site-specific DNA methyltransferase, putative [Ensembl].... 0.02 OrthoFinder
CBI66575 HPB8_1018 conserved hypothetical protein [Ensembl]. Conserved... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment

No InterPro domains available for this sequence

Locus_tag PAERUG_E11_London_26_VIM_2_06_13_04823