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CRP38492 (ssuC_5)


Aliases : ssuC_5

Description : Putative aliphatic sulfonates transport permease protein SsuC [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000206 (OrthoFinder) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP38492
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73470 tauC, b0367 taurine ABC transporter permease [Ensembl].... 0.1 OrthoFinder
AGT23895 N559_2183 ABC transporter, permease protein [Ensembl].... 0.05 OrthoFinder
AGT24969 N559_3311 alkanesulfonate transporter permease subunit [Ensembl].... 0.03 OrthoFinder
AGT25725 N559_4099 taurine transporter subunit [Ensembl]. transmembrane... 0.03 OrthoFinder
CCL19424 ssuC, BN171_3120003 ABC-type transport system, sulfonate-family permease... 0.02 OrthoFinder
CPC96936 ssuC, ERS093114_01751 ABC transporter permease protein [Ensembl].... 0.06 OrthoFinder
CRO44385 cmpB_1 Bicarbonate transport system permease protein CmpB... 0.12 OrthoFinder
CRP16761 cmpB_2 Bicarbonate transport system permease protein CmpB... 0.05 OrthoFinder
EDJ90083 CGSHi22421_06553 ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 93 261
Locus_tag PAERUG_E11_London_26_VIM_2_06_13_05235