CRP40786 (ccmB)

Aliases : ccmB

Description : Cytochrome c-type biogenesis protein CcmB [Ensembl]. CcmB protein [Interproscan].

Gene families : OG_02_0001646 (OrthoFinder) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CRP40786
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AAC75260	ccmB, b2200	heme export ABC transporter permease [Ensembl]. CcmB...	0.06	OrthoFinder
AAL21155	STM2253, ccmB	ABC superfamily (membrane) heme exporter protein...	0.05	OrthoFinder
AAL22677	STM3818, ccmB	heme exporter protein [Ensembl]. CcmB protein [Interproscan].	0.05	OrthoFinder
AGT23923	N559_2211	heme exporter permease component [Ensembl].	0.08	OrthoFinder
EDJ91885	CGSHi22421_09018	heme exporter protein B [Ensembl]. CcmB protein [Interproscan].	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015232	heme transmembrane transporter activity	IEA	Interproscan
BP	GO:0015886	heme transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0017004	cytochrome complex assembly	IEA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901678	iron coordination entity transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	Enrichment
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Enrichment
BP	GO:0006400	tRNA modification	IEP	Enrichment
BP	GO:0008033	tRNA processing	IEP	Enrichment
BP	GO:0008360	regulation of cell shape	IEP	Enrichment
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0015658	branched-chain amino acid transmembrane transporter activity	IEP	Enrichment
BP	GO:0015803	branched-chain amino acid transport	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0020037	heme binding	IEP	Enrichment
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	Enrichment
BP	GO:0022604	regulation of cell morphogenesis	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment
MF	GO:0045301	tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity	IEP	Enrichment
MF	GO:0046906	tetrapyrrole binding	IEP	Enrichment
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Enrichment
BP	GO:0050793	regulation of developmental process	IEP	Enrichment
BP	GO:0065008	regulation of biological quality	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003544	Cyt_c_biogenesis_CcmB	6	219

External Links

Locus_tag	PAERUG_E11_London_26_VIM_2_06_13_05303