Aliases : ccmC
Description : Cytochrome c-type biogenesis protein CcmC [Ensembl]. Cytochrome C assembly protein [Interproscan].
Gene families : OG_02_0001645 (OrthoFinder) Phylogenetic Tree(s): OG0001645_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRP40813 | |
Cluster | HCCA: Cluster_52 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC75259 | ccmC, b2199 | heme export ABC transporter permease; CcmE-interacting... | 0.11 | OrthoFinder | |
AAL21154 | STM2252, ccmC | heme exporter protein [Ensembl]. Cytochrome C assembly... | 0.08 | OrthoFinder | |
AAL22676 | STM3817, ccmC | ABC superfamily (membrane) heme exporter protein... | 0.08 | OrthoFinder | |
AGT23924 | N559_2212 | heme ABC transporter membrane protein [Ensembl]. | 0.07 | OrthoFinder | |
EDJ91886 | CGSHi22421_09023 | heme exporter protein C [Ensembl]. Cytochrome C assembly... | 0.05 | OrthoFinder | |
KNA59631 | VCV51_031377, CcmC | heme exporter protein CcmC [Ensembl]. Cytochrome C... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0017004 | cytochrome complex assembly | IEA | Interproscan |
MF | GO:0020037 | heme binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006811 | ion transport | IEP | Enrichment |
BP | GO:0006812 | cation transport | IEP | Enrichment |
BP | GO:0006826 | iron ion transport | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015232 | heme transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015658 | branched-chain amino acid transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015803 | branched-chain amino acid transport | IEP | Enrichment |
BP | GO:0015886 | heme transport | IEP | Enrichment |
CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
MF | GO:0016853 | isomerase activity | IEP | Enrichment |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:1901678 | iron coordination entity transport | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002541 | Cyt_c_assembly | 14 | 185 |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_05304 |