Aliases : OG1RF_10379
Description : phage integrase family site-specific recombinase [Ensembl]. HxlR-like helix-turn-helix [Interproscan].
Gene families : OG_02_0000160 (OrthoFinder) Phylogenetic Tree(s): OG0000160_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA93066 | |
Cluster | HCCA: Cluster_2 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AKI48819 | L2625_00893 | transcriptional regulator, MarR family [Ensembl].... | 0.04 | OrthoFinder | |
AKI49148 | L2625_01237 | transcriptional regulator, MarR family [Ensembl].... | 0.06 | OrthoFinder | |
CCP45904 | Rv3095 | Hypothetical transcriptional regulatory protein... | 0.02 | OrthoFinder | |
CPD24995 | yybR, ERS093114_02388 | MarR family transcriptional regulator [Ensembl].... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006284 | base-excision repair | IEP | Enrichment |
BP | GO:0006811 | ion transport | IEP | Enrichment |
BP | GO:0006950 | response to stress | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0009235 | cobalamin metabolic process | IEP | Enrichment |
BP | GO:0009236 | cobalamin biosynthetic process | IEP | Enrichment |
MF | GO:0015234 | thiamine transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015888 | thiamine transport | IEP | Enrichment |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
BP | GO:0030001 | metal ion transport | IEP | Enrichment |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
BP | GO:0050896 | response to stimulus | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
BP | GO:0072348 | sulfur compound transport | IEP | Enrichment |
MF | GO:1901474 | azole transmembrane transporter activity | IEP | Enrichment |
MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002577 | HTH_HxlR | 16 | 103 |
No external refs found! |