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Aliases : rmlC
Description : dTDP-4-dehydrorhamnose 3,5-epimerase [Ensembl]. dTDP-4-dehydrorhamnose 3 [Interproscan].
Gene families : OG_02_0000937 (OrthoFinder) Phylogenetic Tree(s): OG0000937_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CRP49948 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAK99125 | spr0321, cps2M | The type 2 capsule locus of Streptococcus pneumoniae... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008830 | dTDP-4-dehydrorhamnose 3,5-epimerase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Enrichment |
| MF | GO:0004312 | fatty acid synthase activity | IEP | Enrichment |
| MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Enrichment |
| BP | GO:0017000 | antibiotic biosynthetic process | IEP | Enrichment |
| BP | GO:0017144 | drug metabolic process | IEP | Enrichment |
| BP | GO:0019346 | transsulfuration | IEP | Enrichment |
| BP | GO:0030258 | lipid modification | IEP | Enrichment |
| BP | GO:0030259 | lipid glycosylation | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000888 | dTDP_sugar_isom | 6 | 175 |
| Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_05599 |