CRP68785 (dmlR_33)


Aliases : dmlR_33

Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CRP68785
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC74410 pgrR, b1328 murein peptide degradation regulator [Ensembl]. LysR... 0.01 OrthoFinder
AAC74869 dmlR, b1799 transcriptional activator of dmlA [Ensembl]. LysR... 0.03 OrthoFinder
AAL20594 STM1677 putative LysR family transcriptional regulator... 0.03 OrthoFinder
AAL22236 STM3367, yhcS putative LysR family transcriptional regulator... 0.03 OrthoFinder
AGT22322 N559_0518 putative DNA-binding transcriptional regulator... 0.04 OrthoFinder
AGT22561 N559_0770 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23444 N559_1702 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT23535 N559_1799 LysR substrate binding domain protein [Ensembl]. LysR... 0.04 OrthoFinder
AGT23560 N559_1826 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT24245 N559_2564 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
CRO00805 dmlR_5 D-malate degradation protein R [Ensembl]. LysR substrate... 0.01 OrthoFinder
CRO13028 dmlR_8 D-malate degradation protein R [Ensembl]. LysR substrate... 0.01 OrthoFinder
CRO60046 dmlR_16 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
CRO69698 dmlR_18 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
CRO75806 dmlR_19 D-malate degradation protein R [Ensembl]. LysR substrate... 0.01 OrthoFinder
CRP53621 dmlR_30 D-malate degradation protein R [Ensembl]. LysR substrate... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006493 protein O-linked glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 4 63
IPR005119 LysR_subst-bd 88 298