Aliases : dmlR_33
Description : D-malate degradation protein R [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CRP68785 | |
Cluster | HCCA: Cluster_11 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74410 | pgrR, b1328 | murein peptide degradation regulator [Ensembl]. LysR... | 0.01 | OrthoFinder | |
AAC74869 | dmlR, b1799 | transcriptional activator of dmlA [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AAL20594 | STM1677 | putative LysR family transcriptional regulator... | 0.03 | OrthoFinder | |
AAL22236 | STM3367, yhcS | putative LysR family transcriptional regulator... | 0.03 | OrthoFinder | |
AGT22322 | N559_0518 | putative DNA-binding transcriptional regulator... | 0.04 | OrthoFinder | |
AGT22561 | N559_0770 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT23444 | N559_1702 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT23535 | N559_1799 | LysR substrate binding domain protein [Ensembl]. LysR... | 0.04 | OrthoFinder | |
AGT23560 | N559_1826 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
AGT24245 | N559_2564 | LysR family transcriptional regulator [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRO00805 | dmlR_5 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.01 | OrthoFinder | |
CRO13028 | dmlR_8 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.01 | OrthoFinder | |
CRO60046 | dmlR_16 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.02 | OrthoFinder | |
CRO69698 | dmlR_18 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.02 | OrthoFinder | |
CRO75806 | dmlR_19 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.01 | OrthoFinder | |
CRP53621 | dmlR_30 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000030 | mannosyltransferase activity | IEP | Enrichment |
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
MF | GO:0005215 | transporter activity | IEP | Enrichment |
BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
BP | GO:0006493 | protein O-linked glycosylation | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
MF | GO:0015204 | urea transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015840 | urea transport | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
BP | GO:0019755 | one-carbon compound transport | IEP | Enrichment |
MF | GO:0019842 | vitamin binding | IEP | Enrichment |
MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Enrichment |
BP | GO:0042886 | amide transport | IEP | Enrichment |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | Enrichment |
BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
BP | GO:0071918 | urea transmembrane transport | IEP | Enrichment |
MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
Locus_tag | PAERUG_E11_London_26_VIM_2_06_13_06145 |