KNA52275 (VCV51_033441)

Aliases : VCV51_033441

Description : deoR family Bacterial regulatory protein [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA52275
Cluster	HCCA: Cluster_5

Target	Alias	Description	ECC score	Gene Family Method
AAC77148	ulaR, b4191	transcriptional repressor for the L-ascorbate...	0.07	OrthoFinder
AAL19128	STM0164	putative LysR family transcriptional regulator...	0.03	OrthoFinder
AAL21717	STM2837, srlR	transcriptional repressor for glucitol operon [Ensembl]....	0.04	OrthoFinder
AAL22864	STM4025, yihW	putative glycerol-3-phosphate regulon repressor...	0.03	OrthoFinder
AGT22846	N559_1069, FucR	DNA-binding transcriptional activator FucR [Ensembl]....	0.04	OrthoFinder
AGT23975	N559_2272	putative DeoR-type transcriptional regulator [Ensembl]....	0.03	OrthoFinder
AGT26302	N559_4710, UlaR	transcriptional repressor UlaR [Ensembl]. DeoR C...	0.06	OrthoFinder
CRP66538	glpR_2	Glycerol-3-phosphate regulon repressor [Ensembl]. DeoR C...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Enrichment
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
BP	GO:0009112	nucleobase metabolic process	IEP	Enrichment
BP	GO:0015804	neutral amino acid transport	IEP	Enrichment
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0032328	alanine transport	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:0046112	nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014036	DeoR_C	76	230
IPR001034	DeoR_HTH	6	61

External Links

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KNA52275 (VCV51_033441)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation