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  5. KNA52460

KNA52460 (VCV51_030124)


Aliases : VCV51_030124

Description : binding-protein-dependent transport system inner membrane component [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52460
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC74327 oppC, b1245 oligopeptide ABC transporter permease [Ensembl].... 0.1 OrthoFinder
AAC74374 sapC, b1292 antimicrobial peptide transport ABC transporter permease... 0.11 OrthoFinder
AAC74558 ddpC, b1485 D,D-dipeptide ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAC76567 dppC, b3542 dipeptide/heme ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAK99995 spr1192, appC ABC transporter membrane-spanning permease-oligopeptide... 0.02 OrthoFinder
AAL22489 STM3628, dppC dipeptide transport protein 2 [Ensembl]. N-terminal TM... 0.02 OrthoFinder
AEA93324 opp1C, OG1RF_10637 oligopeptide ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA95054 opp2C, OG1RF_12367 ABC superfamily ATP binding cassette transporter, ABC... 0.08 OrthoFinder
AGT22075 N559_0253 dipeptide transporter [Ensembl]. N-terminal TM domain of... 0.05 OrthoFinder
AGT23465 N559_1723 ABC transporter permease [Ensembl]. N-terminal TM domain... 0.03 OrthoFinder
AGT23804 N559_2086 oligopeptide transport permease protein [Ensembl].... 0.02 OrthoFinder
AKI48109 L2625_00136 oligopeptide ABC transporter, permease protein... 0.08 OrthoFinder
CPC43619 oppC_1, ERS093114_00434 Oligopeptide transport system permease protein oppC... 0.02 OrthoFinder
CPC43895 oppC_2, ERS093114_00442 Oligopeptide transport system permease protein oppC... 0.12 OrthoFinder
CPC72124 opp-3C, ERS093114_01159 oligopeptide permease%2C channel-forming protein... 0.04 OrthoFinder
CPD17831 opp-1C, ERS093114_02218 Oligopeptide transporter putative membrane permease... 0.03 OrthoFinder
CRO33006 gsiD Glutathione transport system permease protein GsiD... 0.02 OrthoFinder
CRP12184 dppC Dipeptide transport system permease protein DppC... 0.07 OrthoFinder
EDJ90655 CGSHi22421_04078 dipeptide transport system permease protein [Ensembl].... 0.03 OrthoFinder
EDJ90882 CGSHi22421_03498 peptide ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91925 oppD, CGSHi22421_09218 oligopeptide transporter ATP-binding component... 0.04 OrthoFinder
KNA51871 VCV51_030401 binding-protein-dependent transport system inner... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 116 309
IPR025966 OppC_N 18 69
No external refs found!