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KNA52702 (VCV51_031523, RibD)


Aliases : VCV51_031523, RibD

Description : riboflavin biosynthesis protein RibD [Ensembl]. RibD C-terminal domain, Cytidine and deoxycytidylate deaminase zinc-binding region [Interproscan].


Gene families : OG_02_0000563 (OrthoFinder) Phylogenetic Tree(s): OG0000563_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52702
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAK98968 spr0164, ribD Riboflavin biosynthese; a deaminase [Ensembl]. RibD... 0.02 OrthoFinder
AHY40796 CJ8421_08120 Diaminohydroxyphosphoribosylaminopyrimidine deaminase /... 0.03 OrthoFinder
CPD29715 ribD, ERS093114_02504 5-amino-6-(5-phosphoribosylamino)uracil reductase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0006103 2-oxoglutarate metabolic process IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006538 glutamate catabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
CC GO:0009288 bacterial-type flagellum IEP Enrichment
CC GO:0009424 bacterial-type flagellum hook IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0019551 glutamate catabolic process to 2-oxoglutarate IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0043649 dicarboxylic acid catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002125 CMP_dCMP_dom 8 104
IPR002734 RibDG_C 152 356
No external refs found!