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  5. KNA52750

KNA52750 (VCV51_031533)


Aliases : VCV51_031533

Description : GGDEF domain-containing protein [Ensembl]. CHASE4 domain, Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA52750
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
CCL17606 BN171_1610002 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CCL20419 BN171_440007 Putative CheY-like chemosensory protein [Ensembl].... 0.04 OrthoFinder
CRO35153 ycdT_1 putative diguanylate cyclase YcdT [Ensembl]. PAS fold,... 0.02 OrthoFinder
CRO51132 pleD_1 Stalked cell differentiation-controlling protein... 0.03 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Enrichment
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Enrichment
CC GO:0009288 bacterial-type flagellum IEP Enrichment
CC GO:0009424 bacterial-type flagellum hook IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
BP GO:0032101 regulation of response to external stimulus IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0040012 regulation of locomotion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0050920 regulation of chemotaxis IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 340 498
IPR007892 CHASE4 58 212
No external refs found!