1. Home
  2. Species
  3. Vibrio cholerae
  4. Sequence
  5. KNA53283

KNA53283 (VCV51_031618)


Aliases : VCV51_031618

Description : UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase [Ensembl]. Mur ligase family, Mur ligase middle domain [Interproscan].


Gene families : OG_02_0000378 (OrthoFinder) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA53283
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC73197 murF, b0086 UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine... 0.12 OrthoFinder
AAL00318 spr1514, murF UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-... 0.03 OrthoFinder
AAL19088 STM0124, murF D-alanine:D-alanine-adding enzyme [Ensembl]. Mur ligase... 0.08 OrthoFinder
AGT25953 N559_4340 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.07 OrthoFinder
AKP14610 murF, WX61_00529 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.05 OrthoFinder
CCG27254 No alias UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate... 0.05 OrthoFinder
CCL19117 murF, BN171_2870047 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.03 OrthoFinder
CCP44933 murF, Rv2157c Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2,... 0.03 OrthoFinder
CRP08587 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.09 OrthoFinder
EDJ91938 murE, CGSHi22421_09283 UDP-N-acetylmuramoylalanyl-D-glutamate--2,... 0.07 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009653 anatomical structure morphogenesis IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
BP GO:0032502 developmental process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070206 protein trimerization IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000713 Mur_ligase_N 24 79
IPR013221 Mur_ligase_cen 105 293
IPR004101 Mur_ligase_C 314 393
No external refs found!