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  5. KNA54690

KNA54690 (VCV51_030775)


Aliases : VCV51_030775

Description : GGDEF domain-containing protein [Ensembl]. Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54690
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC74595 dgcF, b1522 putative membrane-bound diguanylate cyclase [Ensembl].... 0.02 OrthoFinder
AGT24348 N559_2672 putative transport protein [Ensembl]. GGDEF domain... 0.03 OrthoFinder
AGT26512 N559_4928 hypothetical protein [Ensembl]. GGDEF domain, Cache... 0.04 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.04 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.04 OrthoFinder
CRN70164 gmr_2 Cyclic di-GMP phosphodiesterase Gmr [Ensembl]. PAS fold,... 0.04 OrthoFinder
CRO93456 ydaM_1 putative diguanylate cyclase YdaM [Ensembl]. PAS fold,... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004040 amidase activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0010565 regulation of cellular ketone metabolic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0019216 regulation of lipid metabolic process IEP Enrichment
BP GO:0019217 regulation of fatty acid metabolic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0045301 tRNA-(2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine)-hydroxylase activity IEP Enrichment
BP GO:0062012 regulation of small molecule metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 335 486
No external refs found!