Aliases : opp1A, OG1RF_10634
Description : oligopeptide ABC superfamily ATP binding cassette transporter, binding protein [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].
Gene families : OG_02_0000186 (OrthoFinder) Phylogenetic Tree(s): OG0000186_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AEA93321 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74325 | oppA, b1243 | oligopeptide ABC transporter periplasmic binding protein... | 0.07 | OrthoFinder | |
AGT23802 | N559_2084 | oligopeptide ABC transporter periplasmic... | 0.05 | OrthoFinder | |
AKI48121 | L2625_00148 | bacterial extracellular solute-binding protein, family 5... | 0.08 | OrthoFinder | |
AKI50500 | L2625_02690 | bacterial extracellular solute-binding protein, family 5... | 0.07 | OrthoFinder | |
CPC43788 | oppA_2, ERS093114_00439 | Oligopeptide ABC transporter%2C periplasmic... | 0.05 | OrthoFinder | |
EDJ91927 | oppB, CGSHi22421_09228 | oligopeptide permease ABC transporter membrane protein... | 0.05 | OrthoFinder | |
KNA54677 | VCV51_030763 | bacterial extracellular solute-binding protein, family 5... | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006541 | glutamine metabolic process | IEP | Enrichment |
BP | GO:0006542 | glutamine biosynthetic process | IEP | Enrichment |
BP | GO:0006810 | transport | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
BP | GO:0015833 | peptide transport | IEP | Enrichment |
CC | GO:0016020 | membrane | IEP | Enrichment |
MF | GO:0016211 | ammonia ligase activity | IEP | Enrichment |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Enrichment |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
BP | GO:0042886 | amide transport | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
BP | GO:0051179 | localization | IEP | Enrichment |
BP | GO:0051234 | establishment of localization | IEP | Enrichment |
BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000914 | SBP_5_dom | 92 | 474 |
No external refs found! |