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  5. KNA54882

KNA54882 (VCV51_031808)


Aliases : VCV51_031808

Description : GGDEF domain-containing protein [Ensembl]. Diguanylate cyclase [Interproscan].


Gene families : OG_02_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA54882
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AAC74423 dgcM, b1341 diguanylate cyclase, csgD regulator [Ensembl]. PAS fold,... 0.03 OrthoFinder
AAC74563 dosC, b1490 diguanylate cyclase, cold-and stationary phase-induced... 0.03 OrthoFinder
AGT23545 N559_1811 hypothetical protein [Ensembl]. GGDEF domain, GAF domain... 0.03 OrthoFinder
AGT24792 N559_3131 putative sensor kinase [Ensembl]. GGDEF domain, HAMP... 0.03 OrthoFinder
CCL20093 BN171_3690037 Putative signaling protein [Ensembl]. Diguanylate... 0.03 OrthoFinder
CCL20486 BN171_550008 Putative diguanylate kinase signaling protein (fragment)... 0.03 OrthoFinder
CCL20487 BN171_560001 Putative diguanylate kinase signaling protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006783 heme biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0042925 benzoate transmembrane transporter activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
InterPro domains Description Start Stop
IPR000160 GGDEF_dom 156 307
No external refs found!