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Aliases : VCV51_031707
Description : sigma 54 modulation protein/S30EA ribosomal protein [Ensembl]. Sigma 54 modulation protein / S30EA ribosomal protein [Interproscan].
Gene families : OG_02_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: KNA55034 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75646 | raiA, b2597 | cold shock protein associated with 30S ribosomal subunit... | 0.04 | OrthoFinder | |
| AAC76235 | hpf, b3203 | ribosome hibernation promoting factor HPF; stabilizes... | 0.03 | OrthoFinder | |
| AAL22190 | STM3321, yhbH | putative sigma N modulation factor [Ensembl]. Sigma 54... | 0.04 | OrthoFinder | |
| AGT23098 | N559_1336 | sigma-54 modulation protein [Ensembl]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0044238 | primary metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006006 | glucose metabolic process | IEP | Enrichment |
| BP | GO:0006094 | gluconeogenesis | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Enrichment |
| BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
| BP | GO:0019319 | hexose biosynthetic process | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003489 | RHF/RaiA | 3 | 92 |
| No external refs found! |