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  5. KNA55036

KNA55036 (VCV51_031705)


Aliases : VCV51_031705

Description : ABC transporter ATP-binding protein [Ensembl]. ABC transporter, Branched-chain amino acid ATP-binding cassette transporter [Interproscan].


Gene families : OG_02_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: KNA55036
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AAC76233 lptB, b3201 lipopolysaccharide export ABC transporter ATPase... 0.07 OrthoFinder
AKI49718 L2625_01859 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CRO14457 ybhF_1 putative ABC transporter ATP-binding protein YbhF... 0.01 OrthoFinder
CRP09878 lptB_2 Lipopolysaccharide export system ATP-binding protein... 0.05 OrthoFinder
EDJ91952 CGSHi22421_09353 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016989 sigma factor antagonist activity IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR032823 BCA_ABC_TP_C 214 236
IPR003439 ABC_transporter-like_ATP-bd 20 166
No external refs found!