KNA56019 (VCV51_030935)

Aliases : VCV51_030935

Description : lacI family Bacterial regulatory protein [Ensembl]. Bacterial regulatory proteins, Periplasmic binding protein-like domain [Interproscan].

Gene families : OG_02_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA56019
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAL00442	spr1639, ccpA	Catabolite control protein [Ensembl]. Bacterial...	0.03	OrthoFinder
AAL21888	STM3012	putative transcriptional regulator [Ensembl]. Bacterial...	0.04	OrthoFinder
AGT25335	N559_3695	putative periplasmic binding protein/LacI...	0.03	OrthoFinder
AGT25422	N559_3786	transcriptional regulator, LacI family [Ensembl]....	0.02	OrthoFinder
CCL20673	BN171_880009	Transcriptional regulator, LacI family [Ensembl]....	0.04	OrthoFinder
EDJ90887	CGSHi22421_03523	HTH-type transcriptional repressor PurR [Ensembl]....	0.03	OrthoFinder
KNA60659	VCV51_032098	lacI family Bacterial regulatory protein [Ensembl]....	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Enrichment
MF	GO:0004521	endoribonuclease activity	IEP	Enrichment
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008813	chorismate lyase activity	IEP	Enrichment
BP	GO:0009271	phage shock	IEP	Enrichment
BP	GO:0009605	response to external stimulus	IEP	Enrichment
BP	GO:0009607	response to biotic stimulus	IEP	Enrichment
BP	GO:0009615	response to virus	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
MF	GO:0016833	oxo-acid-lyase activity	IEP	Enrichment
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Enrichment
BP	GO:0035556	intracellular signal transduction	IEP	Enrichment
BP	GO:0040011	locomotion	IEP	Enrichment
BP	GO:0043207	response to external biotic stimulus	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0051707	response to other organism	IEP	Enrichment
BP	GO:0098586	cellular response to virus	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000843	HTH_LacI	4	48

External Links

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KNA56019 (VCV51_030935)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation