KNA58243 (VCV51_032751)

Aliases : VCV51_032751

Description : response regulator receiver domain-containing protein [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KNA58243
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAC74680	rstA, b1608	response regulator of RstAB two-component system...	0.02	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.01	OrthoFinder
AAK99332	spr0528, vncR	VncR, response regulator [Ensembl]. Transcriptional...	0.03	OrthoFinder
AAK99910	spr1107, rr02	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAL21035	STM2131, baeR	response regulator in two-component regulatory system...	0.05	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.02	OrthoFinder
AEA95222	OG1RF_12535	response regulator [Ensembl]. Response regulator...	0.03	OrthoFinder
AGT22192	N559_0379	osmolarity response regulator [Ensembl]. Response...	0.03	OrthoFinder
AGT23469	N559_1728, BaeR	DNA-binding transcriptional regulator BaeR [Ensembl]....	0.04	OrthoFinder
AGT24481	N559_2808, RstA	DNA-binding transcriptional regulator RstA [Ensembl]....	0.04	OrthoFinder
AGT26042	N559_4437, CreB	DNA-binding response regulator CreB [Ensembl]. Response...	0.04	OrthoFinder
AKI48258	L2625_00311	DNA-binding response regulator [Ensembl]. OmpR/PhoB-type...	0.04	OrthoFinder
AKI50514	L2625_02705	DNA-binding response regulator [Ensembl]. Signal...	0.03	OrthoFinder
AKP15489	ompR, WX61_01443	Transcriptional regulatory protein OmpR [Ensembl]....	0.03	OrthoFinder
CCG26924	No alias	Two-component system response regulator [Ensembl]....	0.03	OrthoFinder
CCG27642	No alias	Two-component response regulator SA14-24 [Ensembl]....	0.04	OrthoFinder
CCL18472	BN171_2380003	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20055	BN171_3670038	Two-component response regulator, CheY family [Ensembl]....	0.03	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.01	OrthoFinder
CPD21777	hssR, ERS093114_02323	two-component response regulator [Ensembl]....	0.03	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
EDJ90537	CGSHi22421_03168	phosphate regulon transcriptional regulatory protein...	0.06	OrthoFinder
EDJ91418	CGSHi22421_04923	response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001539	cilium or flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0006281	DNA repair	IEP	Enrichment
BP	GO:0006284	base-excision repair	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Enrichment
BP	GO:0009271	phage shock	IEP	Enrichment
MF	GO:0009378	four-way junction helicase activity	IEP	Enrichment
BP	GO:0009605	response to external stimulus	IEP	Enrichment
BP	GO:0009607	response to biotic stimulus	IEP	Enrichment
BP	GO:0009615	response to virus	IEP	Enrichment
BP	GO:0015833	peptide transport	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
BP	GO:0033554	cellular response to stress	IEP	Enrichment
BP	GO:0040011	locomotion	IEP	Enrichment
BP	GO:0042886	amide transport	IEP	Enrichment
BP	GO:0043165	Gram-negative-bacterium-type cell outer membrane assembly	IEP	Enrichment
BP	GO:0043207	response to external biotic stimulus	IEP	Enrichment
BP	GO:0043213	bacteriocin transport	IEP	Enrichment
BP	GO:0048870	cell motility	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
BP	GO:0051707	response to other organism	IEP	Enrichment
BP	GO:0051716	cellular response to stimulus	IEP	Enrichment
BP	GO:0071709	membrane assembly	IEP	Enrichment
BP	GO:0071973	bacterial-type flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0097588	archaeal or bacterial-type flagellum-dependent cell motility	IEP	Enrichment
BP	GO:0098586	cellular response to virus	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	145	216
IPR001789	Sig_transdc_resp-reg_receiver	3	113

External Links

No external refs found!

KNA58243 (VCV51_032751)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation